Thanks, I do plan to use a organisation structure with plain directories. Please do share, it would help me greatly!
Indeed, I too plan to use markdown for any notes on what I’m looking at/is relevant to the object of interest.
Thank you for the note about archivebox, I didn’t think about this before! Indeed, that would be very important: are you writing an alternative tool? Would you like to share the repo? I was considering just using wget to pull down pages but that might not work all the time.