computingnature, 11 months ago to random Make your next discovery using #Rastermap, a visualization method for large-scale neural data in #python. Paper now out: https://www.biorxiv.org/content/10.1101/2023.07.25.550571v1 (CLICK ON THE GIF) #neuroscience gif of neural activity re-sorted by Rastermap algorithm
Make your next discovery using #Rastermap, a visualization method for large-scale neural data in #python. Paper now out: https://www.biorxiv.org/content/10.1101/2023.07.25.550571v1 (CLICK ON THE GIF) #neuroscience
gif of neural activity re-sorted by Rastermap algorithm
computingnature, 11 months ago You can explore your data in the graphical user interface: #Rastermap Rastermap graphical user interface to explore data
You can explore your data in the graphical user interface: #Rastermap
Rastermap graphical user interface to explore data
computingnature, 11 months ago #Rastermap finds single-trial sequences of neural activity in a virtual reality experiment:
#Rastermap finds single-trial sequences of neural activity in a virtual reality experiment:
computingnature, 11 months ago #Rastermap finds movement-related structure in spontaneous activity in complete darkness:
#Rastermap finds movement-related structure in spontaneous activity in complete darkness:
computingnature, 11 months ago #Rastermap sorting of #hippocampus data from Grosmark & Buzsaki, 2016:
#Rastermap sorting of #hippocampus data from Grosmark & Buzsaki, 2016:
computingnature, 11 months ago #Rastermap sorting of wholebrain #zebrafish activity from Chen et al, 2018:
#Rastermap sorting of wholebrain #zebrafish activity from Chen et al, 2018:
computingnature, 11 months ago #Rastermap sorting of neurons from #ReinforcementLearning agents playing Atari games:
#Rastermap sorting of neurons from #ReinforcementLearning agents playing Atari games:
computingnature, 11 months ago Learn more on our github: https://github.com/MouseLand/rastermap. #Rastermap is fast thanks to #python #numpy, #scipy, #numba, and #scikit-learn. The GUI is powered by #pyqt and #pyqtgraph, and supports npz, npy, mat and #nwb ophys files.
Learn more on our github: https://github.com/MouseLand/rastermap. #Rastermap is fast thanks to #python #numpy, #scipy, #numba, and #scikit-learn. The GUI is powered by #pyqt and #pyqtgraph, and supports npz, npy, mat and #nwb ophys files.
computingnature, 11 months ago Excited to see new datasets explored with this! If you have issues, please post an issue on the #Rastermap github: https://github.com/MouseLand/rastermap/issues.
Excited to see new datasets explored with this! If you have issues, please post an issue on the #Rastermap github: https://github.com/MouseLand/rastermap/issues.
manisha, 11 months ago wow, this happened within a day of announcing this #OpenSource project! thank you for sharing this @kevinbolding Congratulations and thank you @computingnature for sharing both the source code for #Rastermap and previous #OpenData So stoked and look forward to this becoming the norm where scientists don't have to keep reinventing the wheel in their own labs #neuroscience #AcademicChatter @academicchatter @academicsunite
wow, this happened within a day of announcing this #OpenSource project! thank you for sharing this @kevinbolding
Congratulations and thank you @computingnature for sharing both the source code for #Rastermap and previous #OpenData
So stoked and look forward to this becoming the norm where scientists don't have to keep reinventing the wheel in their own labs
#neuroscience #AcademicChatter @academicchatter @academicsunite